Taliban accuses Pakistan of backing militants, fuelling Afghan instability

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Taliban accuses Pakistan of backing militants, fuelling Afghan instability

Synopsis

The Taliban has directly accused Pakistan's military of orchestrating cross-border militant infiltration into Afghanistan — killing 41 and capturing 62 fighters in Nuristan. Coming from a government that Pakistan helped install, the accusation is a striking reversal, and it aligns Kabul with India, Iran, and Western voices that have long charged Islamabad with running a 'militant ecosystem' as state policy.

Key Takeaways

The Taliban Defence Ministry accused Pakistan's military of providing 'direct guidance and cooperation' for a cross-border militant incursion into Nuristan's Kamdesh district .
Afghan forces killed 41 militants and captured 62 others in the operation; all were allegedly linked to ISIS-affiliated groups backed by Islamabad .
India , Iran , and Western nations have separately made similar allegations about Pakistan supporting militant groups beyond its borders.
Former US Joint Chiefs Chairman Admiral Mike Mullen previously stated that the Haqqani Network 'acts as a veritable arm of Pakistan's intelligence.' Critics note the irony: Pakistan, which long portrayed Afghanistan as a terror exporter, now faces the same accusation — and its own domestic militant blowback is mounting.

Afghanistan's Taliban government has formally accused Pakistan of backing, training, and directing armed groups involved in cross-border infiltration, adding a sharp new dimension to the already fractured relationship between the two neighbours. The allegations, documented in a report by South Africa-based Independent Online (IOL), echo longstanding charges levelled by India, Iran, and several Western nations against Islamabad.

Key Developments in Nuristan

According to the Taliban, Afghan forces conducted a major counter-infiltration operation in Nuristan province's Kamdesh district, killing 41 militants and capturing 62 others. All those killed or captured were allegedly linked to ISIS-affiliated groups and reportedly backed by Pakistani authorities.

In a statement dated 29 September, the Taliban Defence Ministry said the operation in Kamdesh had concluded successfully. The Taliban claimed the fighters had crossed into Afghan territory 'with Pakistan's military regime's backing,' according to Afghanistan International.

What Afghanistan's Defence Ministry Said

Kabul's Defence Ministry went further, stating that the infiltration attempt was carried out under the 'direct guidance and cooperation' of the Pakistani military — a direct and unusually explicit accusation from the Taliban administration. Kabul also alleged that Pakistan has been systematically facilitating the recruitment and arming of militants on its soil to foment instability across the border.

A Pattern of Regional Allegations Against Pakistan

The Taliban's accusations are not isolated. For years, India has charged Pakistan with sponsoring cross-border terrorism in Jammu and Kashmir and backing militant groups responsible for attacks across the country, presenting what it describes as evidence of Pakistani state involvement to the international community.

Iran has similarly accused Pakistan's Inter Services Intelligence (ISI) of training and facilitating attacks on Iranian soil. Tehran has demanded decisive action against groups operating from Pakistani territory, specifically naming Jaish al-Adl. Iranian Revolutionary Commander Major General Mohammad Ali Jafari stated that 'Pakistan's government knows where they are, and they are supported by Pakistan's security forces,' according to the IOL report.

Earlier, when US forces were deployed in Afghanistan, Pakistan faced allegations of allowing groups including the Haqqani Network, Lashkar-e-Taiba (LeT), and Jaish-e-Mohammed (JeM) to operate freely. Then-US Joint Chiefs Chairman Admiral Mike Mullen famously declared: 'The Haqqani Network, for one, acts as a veritable arm of Pakistan's intelligence.' European authorities have also voiced concerns about Pakistan serving as a haven for international terrorist organisations.

The Blowback Dimension

Notably, critics have pointed to a deep irony in the current situation. Pakistan, which for years portrayed Afghanistan as a source of regional instability, now faces credible allegations of doing precisely what it accused Kabul of. The IOL report concluded: 'The Pakistani government established what critics describe as a militant ecosystem, using extremist groups as strategic instruments against neighbouring countries. However, this very network of militancy has increasingly turned against Pakistan itself.'

This comes amid Pakistan's own escalating security crisis, with the Pakistani Taliban (TTP) intensifying attacks on Pakistani soil — a development widely attributed to the same militant networks Islamabad allegedly cultivated over decades.

What Happens Next

The Taliban's public and direct accusation against Pakistan's military marks a significant escalation in Kabul-Islamabad relations, which have deteriorated sharply since the Taliban's return to power in 2021. Analysts warn that without a verifiable diplomatic resolution, cross-border skirmishes and proxy confrontations are likely to intensify — with regional consequences for India, Iran, and Central Asia.

Point of View

India, Iran, and Western capitals on the same side of a factual claim — is diplomatically damaging for Pakistan in a way that individual bilateral complaints never were. What mainstream coverage underplays is the blowback dynamic: Pakistan's alleged militant ecosystem, built as a tool of regional influence, has demonstrably destabilised Pakistan itself via the TTP. Islamabad is now simultaneously accused of exporting militancy and unable to suppress the domestic variant it incubated. That structural contradiction is the real story, and no amount of diplomatic deflection resolves it.
NationPress
4 Nov 2026

Frequently Asked Questions

What has the Taliban accused Pakistan of doing in Afghanistan?
The Taliban has accused Pakistan's military of providing 'direct guidance and cooperation' for cross-border militant infiltration into Afghanistan's Nuristan province. Afghan forces killed 41 fighters and captured 62 others in a resulting operation in the Kamdesh district, with all those involved allegedly linked to ISIS-affiliated groups backed by Pakistani authorities.
What happened during the Taliban's operation in Nuristan?
Afghan forces conducted a counter-infiltration operation in Nuristan's Kamdesh district, concluding on 29 September. The operation resulted in 41 militants killed and 62 captured, all allegedly backed by Pakistan's military regime, according to the Taliban Defence Ministry.
Have other countries made similar allegations against Pakistan?
Yes. India has long accused Pakistan of sponsoring cross-border terrorism in Jammu and Kashmir. Iran has accused Pakistan's ISI of backing militant group Jaish al-Adl. Western nations and the former US military leadership have also alleged Pakistani support for the Haqqani Network, Lashkar-e-Taiba, and Jaish-e-Mohammed.
What did Admiral Mike Mullen say about Pakistan and the Haqqani Network?
Then-US Joint Chiefs Chairman Admiral Mike Mullen stated that 'the Haqqani Network, for one, acts as a veritable arm of Pakistan's intelligence.' This remark, made during the period of US military deployment in Afghanistan, remains one of the most direct on-record accusations by a senior American official against Pakistan's military establishment.
Why is the Taliban's accusation against Pakistan significant?
The accusation is notable because Pakistan played a key role in facilitating the Taliban's return to power in Afghanistan in 2021. The Taliban now publicly aligning with India, Iran, and Western nations in charging Islamabad with militant sponsorship represents a significant diplomatic setback for Pakistan and signals a sharp deterioration in Kabul-Islamabad relations.
Nation Press
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